BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037D05LP1|AL430381
(901 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1807 1722 0.0
3x_Contig1790 127 3e-29
3x_Contig1802 100 8e-21
>3x_Contig1807
Length = 66587
Score = 1722 bits (867), Expect = 0.0
Identities = 893/901 (99%), Gaps = 2/901 (0%)
Strand = Plus / Plus
Query: 1 atctaactttttcccttcgaaacctgaagtatttttgtagtttctagagctaatttaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7978 atctaactttttcccttcgaaacctgaagtatttttgtagtttctagagctaatttaatt 8037
Query: 61 gataactccaagggtatgacacttaggcaagattaactaggctaaaatttgttcagccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8038 gataactccaagggtatgacacttaggcaagattaactaggctaaaatttgttcagccag 8097
Query: 121 taggcaaatcaaactgttcaagctgtgcgctcaattttactttgaaattgaatgagaaag 180
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 8098 taggcaaatcaaactgttcaagctgtgcgctcaattttactttgaaattggttgagaaag 8157
Query: 181 agctcatgtggcaaccaatgcttttagacaattatttaattcgaaaggctgagagacatt 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 8158 agctcatgtggcaaccaatgctttgagacaattatttaattcgaaaggctgagagacatt 8217
Query: 241 ttgtctttggaaagcgcccttgtttagcaaaagtagctaayagwataagcttaagcgtat 300
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 8218 ttgtctttggaaagcgcccttgtttagcaaaagtagctaacagaataagcttaagcgtat 8277
Query: 301 tgatcccatttctttacatcgcaaactttgaaggataatctactgactaattctgaaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8278 tgatcccatttctttacatcgcaaactttgaaggataatctactgactaattctgaaaga 8337
Query: 361 ctgaaggcttatgtaaggctgtagtcagctgctgtgcgtaccgcatcacgcacaagagtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8338 ctgaaggcttatgtaaggctgtagtcagctgctgtgcgtaccgcatcacgcacaagagtc 8397
Query: 421 tatgccgtaccctacttgcatcggggtatcaagagaacttttgtgatgttccccgcgcgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 8398 tatgccgtaccctacttgcatcggggtatcaagagaacttttgtgatgttccccg-gcg- 8455
Query: 481 ttgtgtgagcatttctaagatgtcattacagaatcattactaaataagaagctgaaggtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8456 ttgtgtgagcatttctaagatgtcattacagaatcattactaaataagaagctgaaggtg 8515
Query: 541 aattcgacgacatattagttattgttctgcattaaattatacgtgagatcgaaggaacca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8516 aattcgacgacatattagttattgttctgcattaaattatacgtgagatcgaaggaacca 8575
Query: 601 aggagaacactgtaaataatgcacttaattagtcgaccaccgatttaattatccattaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8576 aggagaacactgtaaataatgcacttaattagtcgaccaccgatttaattatccattaat 8635
Query: 661 ttcattatcaactacaagtcagaatgacatccaattacattaatactactaaccctctag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8636 ttcattatcaactacaagtcagaatgacatccaattacattaatactactaaccctctag 8695
Query: 721 acaaagttcctaccaccaaatcttcatatcttctctaaaactaaaaaaattatatgccaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8696 acaaagttcctaccaccaaatcttcatatcttctctaaaactaaaaaaattatatgccaa 8755
Query: 781 tcatcatatctacatcctcctatttggggracatactacgaaaacatctaataatgttgg 840
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 8756 tcatcatatctacatcctcctatttggggaacatactacgaaaacatctaataatgttgg 8815
Query: 841 aattccgtcatggtcgattcgttaccctgaattaatcaggacttgtgcatagcaacaata 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8816 aattccgtcatggtcgattcgttaccctgaattaatcaggacttgtgcatagcaacaata 8875
Query: 901 g 901
|
Sbjct: 8876 g 8876
>3x_Contig1790
Length = 27369
Score = 127 bits (64), Expect = 3e-29
Identities = 162/192 (84%), Gaps = 2/192 (1%)
Strand = Plus / Plus
Query: 549 gacatattagttattgttctgcattaaattatacgtgagatcgaaggaaccaaggagaac 608
||||||||| |||||||||| |||||| || || || |||| ||| ||| ||||||| |
Sbjct: 5095 gacatattaattattgttctacattaacttgtatgtcagatgtaagaaac-aaggagagc 5153
Query: 609 actgtaaataatgcacttaattagtcgaccaccgatttaattatccattaatttcattat 668
|| |||| |||| |||||||||||||| |||| |||||| |||||||| ||| |||||
Sbjct: 5154 accgtaagtaatttacttaattagtcgatcaccaatttaactatccatttatt-cattaa 5212
Query: 669 caactacaagtcagaatgacatccaattacattaatactactaaccctctagacaaagtt 728
|||||||||||||||||| |||| | ||||| ||||||||||||||||||| | ||||
Sbjct: 5213 caactacaagtcagaatggcatctatttacaccaatactactaaccctctaggccaagtc 5272
Query: 729 cctaccaccaaa 740
||||| ||||||
Sbjct: 5273 cctactaccaaa 5284
>3x_Contig1802
Length = 45229
Score = 99.8 bits (50), Expect = 8e-21
Identities = 72/78 (92%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 643 atttaattatccattaatttcattatcaactacaagtcagaatgacatccaattacatta 702
||||||||||| ||| || |||||| |||||||||||||||||| ||||||||||| |||
Sbjct: 45210 atttaattatc-atttatatcattaacaactacaagtcagaatggcatccaattacgtta 45152
Query: 703 atactactaaccctctag 720
||||||||||||||||||
Sbjct: 45151 atactactaaccctctag 45134
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6480
Number of Sequences: 1807
Number of extensions: 6480
Number of successful extensions: 84
Number of sequences better than 1.0e-20: 3
length of query: 901
length of database: 10,358,551
effective HSP length: 16
effective length of query: 885
effective length of database: 10,329,639
effective search space: 9141730515
effective search space used: 9141730515
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)